IRC Chat : 2012-01-05 - OpenMRS

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06:10:22 <maurya> i am unable to start openmrs
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07:32:10 <pushkar> i am unable to start openmrs
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07:36:59 <pushkar> i am getting error unable to start openmrs as deamon when starting openmrs
07:37:40 <pushkar> can anyone help ????
07:44:07 <bwolfe> pushkar, someone had this same error yesterday...
07:44:23 <bwolfe> pushkar, what have you done to get to this point?
07:45:46 <pushkar> i just completed the initial setup
07:46:20 <bwolfe> pushkar, did you have demo data or anything else checked?
07:46:32 <pushkar> yes
07:49:00 <pushkar> here is my server log http://pastebin.com/zAMG5Xzb
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07:55:30 <pushkar> bwolfe:
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08:16:23 <bwolfe> pushkar, might be a bug. you're using hte latest trunk code?
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11:10:18 <Jombiah> I have a problem logging in the program and here is the error report i get The following error occurred at startup: java.lang.RuntimeException: error getting unrun updates on the database javax.servlet.ServletException: java.lang.RuntimeException: error getting unrun updates on the database at org.openmrs.web.Listener.setupNeeded(Listener.java:170) at org.openmrs.web.Listener.contextInitialized(Listener.java:138) at org.apache.
11:12:50 <Jombiah> Caused by: java.lang.RuntimeException: error getting unrun updates on the database at org.openmrs.util.DatabaseUpdater.getUnrunDatabaseChanges(DatabaseUpdater.java:538) at org.openmrs.util.DatabaseUpdater.updatesRequired(DatabaseUpdater.java:231) at org.openmrs.web.Listener.setupNeeded(Listener.java:167) ... 25 more Caused by: liquibase.exception.LockException: Could not acquire change log lock. Currently locked by SUSTAIN-JIN
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11:13:07 <bwolfe> Jombiah, which version?
11:13:09 <bwolfe> (of openmrs)
11:13:40 <bwolfe> Jombiah, I only ask because 1.9.x+ and trunk should clean it up automatically
11:14:02 <Jombiah> let me check
11:14:16 <bwolfe> in other versions you can manually clear the liquibasechangeloglock table. (note the "LOCK" at the end of hte name. that table should only have one row in it)
11:15:56 <Jombiah> Its 1.0
11:16:22 <bwolfe> ??
11:16:24 <bwolfe> 1.10?
11:16:40 <Jombiah> 1.0
11:18:27 <Jombiah> how do i get to unlock it manually
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11:24:12 <surangak> Jombiah, do a truncate table liquibasechangeloglock; on the db
11:30:38 <Jombiah> i have made it empty but the error still pops
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11:54:05 <mallan4> Hi i have got what wanted thank you
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12:05:00 <odong> iam experinencing a problem in OPenMRS, the system cannot start .below is the error message what could be the solution for that java.lang.RuntimeException: error getting unrun updates on the database javax.servlet.ServletException: java.lang.RuntimeException: error getting unrun updates on the database at org.openmrs.web.Listener.setupNeeded(Listener.java:170) at org.openmrs.web.Listener.contextInitialized(Listener.java:138) at or
12:05:25 <odong> at liquibase.lock.LockHandler.waitForLock(LockHandler.java:170) at liquibase.Liquibase.listUnrunChangeSets(Liquibase.java:518) at org.openmrs.util.DatabaseUpdater.getUnrunDatabaseChanges(DatabaseUpdater.java:526)
12:06:55 <odong> this is not clear to me
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12:09:57 <bwolfe> odong, https://wiki.openmrs.org/display/docs/Troubleshooting+OpenMRS
12:09:58 <OpenMRSBot> <http://ln-s.net/8c4X> (at wiki.openmrs.org)
12:10:03 <bwolfe> first bullet point there
12:10:18 <bwolfe> (strangely that took me a while to find via google)
12:15:43 <odong> How do you unlock the liquidbaselockhandler in regards to this problem thank you
12:19:15 <bwolfe> odong, what do you mean?
12:19:32 <bwolfe> odong, you should only have to clear the *lock table in your db to get openmrs to start
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13:05:29 <surangak> good morning james_regen !
13:10:33 <james_regen> surangak: good morning
13:10:52 <surangak> james_regen, atually, its almost night over here :D
13:11:28 <surangak> james_regen, I think that im successful storing / retreiving strategies from the database now
13:11:50 <surangak> I tested it out using the link.regenstrief database (it has more data)
13:12:12 <surangak> I hit one glitch though, and wanted to check out the db contents,
13:12:32 <surangak> and realized that I had forgotten db password to the link.regenstrief server :-)
13:13:04 <surangak> please jog my memory
13:13:21 <james_regen> it should be in the openmrs.properties file
13:13:44 <james_regen> i can guess, but i would look there to make sure.
13:13:56 * surangak realized he had forgotten that
13:14:02 * surangak goes to look
13:22:49 <surangak> james_regen, yep, found it, sorry
13:22:59 <james_regen> no problem
13:23:18 <surangak> james_regen, I was not too productive today, I was basically ttesting to see whats wrong etc.
13:23:26 <surangak> but I think I can deliver this soon
13:23:48 <surangak> spent most of today worrying over that other problem of mine :P
13:25:15 <james_regen> surangak: that's ok, sometimes people get busy or other things come up. i'm not worried about your progress on this at all
13:25:56 <surangak> james_regen, I am hoping to do some better testng tomorrow, and fix up problems.. then maybe we can commit this part before moving any further
13:27:36 <james_regen> that sounds like a good plan
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14:06:43 <downeym> pascal`: http://notes.openmrs.org/2012-01-05implementersforum
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14:23:23 <pascal`> downeym++
14:23:25 <pascal`> Thanks for taking notes
14:23:39 <downeym> pascal`: pleasure :)
14:23:43 <downeym> patrick is now on Adobe Connect
14:23:45 <pascal`> Talking about this on the implementers forum at the moment: http://www.koegni-ehealth.org/
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14:38:15 <wyclif> hi rafa
14:38:59 <wyclif> rafa, i just want to understand the module's functionality better so i have some questions for you
14:41:55 <rafa> wyclif: hi
14:42:08 <rafa> wyclif: go ahead
14:46:00 <wyclif> so when call importedItem.assess what does happends afterwards to it
14:46:25 <wyclif> rafa, so i when call importedItem.assess what does happens afterwards to the item?
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14:47:04 <rafa> wyclif: it's just a flag that will be used when presenting items to users
14:47:30 <rafa> wyclif: if it's true then we won't require user to click "assess" = less items for the user to review
14:47:54 <downeym> pascal`: thanks again for arranging things today!
14:48:07 <wyclif> rafa, and what are the options the user has?
14:48:38 <rafa> wyclif: user can change type of mapping i.e. it may be keep mine or overwrite
14:49:19 <wyclif> cool, so that is why you set the possible actions i.e merge vs map etc?
14:49:23 <wyclif> rafa, cool, so that is why you set the possible actions i.e merge vs map etc?
14:49:25 <rafa> yes
14:49:35 <wyclif> got you, another question
14:50:19 <wyclif> rafa, can multiple resolvers be applied to the same item?
14:50:53 <rafa> wyclif: if you return false from resolve then other resolvers will be used for the same item
14:51:04 <wyclif> rafa, cool
14:51:07 <rafa> wyclif: until true is returned
14:52:18 <wyclif> rafa, i have added a question to one of the reviews, what is the basis that you use to set the existing term prior to invoking resolvers
14:52:47 <rafa> wyclif: it may be set if you previously imported the same item
14:53:08 <rafa> wyclif: so the mapping was once found and will be used by default
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14:53:43 <rafa> wyclif: but you can change it in a resolver if needed
14:54:34 <wyclif> rafa, so you realise in the concept mapping based resolver, i skip checking for duplicate mappings if we already have an existing one when the method is invoked, i guess i need to do that and get rid of the clause
14:55:29 <rafa> wyclif: you shouldn't change the existing one if it's set
14:55:48 <wyclif> rafa, so you are fine with that logic in the resolver?
14:56:07 <rafa> wyclif: let me see again :)
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14:56:29 <wyclif> look at the the review and see the comment i last added
14:56:40 <wyclif> rafa, look at the the review and see the comment i last added
14:56:48 <rafa> wyclif: sure
14:57:14 <wyclif> rafa, well thanks for the insight, i was so green about the module, let me know when you look at the code
14:58:03 <rafa> wyclif: your progress is impresive so far :D
14:58:33 <wyclif> rafa, thanks
15:03:54 <pascal`> downeym, np
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15:19:40 <deadpool_> bwolfe: is there a way to backdate a patient?
15:19:49 <bwolfe> what do you mean by backdate?
15:20:41 <deadpool_> like if patient x was a patient of mine in 2007 but i haven't entered him into the database until now openmrs will say that he is a new patient, but i want the database to recognize that he was originally from 2007
15:24:11 <bwolfe> deadpool_, so are you wanting to set the patient.date_created to 2007? I would not recommend that.
15:24:25 <deadpool_> yeah
15:24:34 <deadpool_> bwolfe: why not?
15:27:05 <bwolfe> because thats not really accurate. the patient.date_created is when the patient was entered in the database. thats now. the obs.obs_datetime values shoudl all be in 2007 though. and its ok to have an obs.obs_datetime from 2007 but an obs.date_created of 2011
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15:31:51 <downeym> Hi maurya and welcome to the #openmrs IRC channel.
15:32:00 <deadpool_> bwolfe: is there a way to backdate encounters?
15:32:24 <bwolfe> deadpool_, encounter.date_created should still be the date it was inserted into the db
15:32:30 <deadpool_> without having to create a module for that?
15:32:36 <bwolfe> deadpool_, encounter.encounter_datetime can be whatever date you want. :-)
15:32:44 <deadpool_> ah ok
15:35:27 <deadpool_> bwolfe: so if i wanted to do some sort of statistics on how many new patients came in an a year I should use the encounter datetime
15:37:18 <bwolfe> deadpool_, yeah, that'd be the right one.
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16:18:39 <mvorobey> hi all!
16:24:52 <downeym> hey mvorobey, welcome :)
16:34:28 <mvorobey> I'd like to join current development sprint, but I do not no is this a good practice to do it, when sprint has already started? And of course, I'll need a time to be more familiar with some details of this ... so I'll be able to create a patch for picked up ticket only after a certain time. Is it acceptable?
16:35:42 <downeym> mvorobey: looks like rafal is offline now
16:35:52 <downeym> mvorobey: perhaps send a mail to dev@o.o list and ask :)
16:36:19 <downeym> mvorobey: i think they can find a way for you to still contribute if you want
16:36:25 <mvorobey> ok, thanks, downeym
16:38:56 <mvorobey> I've already sent mail to devs list, will wait for answer :)
16:40:58 <downeym> mvorobey: cool
16:41:06 <downeym> mvorobey: i guess he'll be back here in irc again soon too
16:42:16 <mvorobey> downeym: this is good
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17:27:48 <mvorobey> rafa: hi, Rafal! I have small question.
17:27:56 <rafa> mvorobey: hi
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17:28:08 <rafa> mvorobey: go ahead
17:28:23 <mvorobey> sould I use MDS source code from this location http://svn.openmrs.org/openmrs-modules/metadatasharing/trunk/
17:28:27 <mvorobey> ?
17:28:31 <rafa> yes
17:28:39 <mvorobey> ok, thanks, rafa
17:28:57 <rafa> mvorobey: you're welcome
17:29:01 <rafa> mvorobey: thanks for joining us
17:29:15 <rafa> mvorobey: where are you from?
17:29:26 <mvorobey> rafa: am from ukraine
17:29:40 <rafa> mvorobey: so we're neighbours :)
17:29:44 <rafa> mvorobey: I'm from Poland
17:30:23 <rafa> mvorobey: great to have more souls from our region!
17:30:24 <mvorobey> rafa: so, cześć, Rafal :) nice to meet you
17:30:42 <rafa> mvorobey: nice to meet you too!
17:32:06 <mvorobey> rafa: thanx for helping me with all this stuff
17:32:31 <rafa> mvorobey: np
17:32:38 <rafa> mvorobey: what brings you here?
17:34:44 <mvorobey> rafa: month ago we had open source meeting in our university and some guys told us about OpenMRS community, they said that it works on very interesting project, has great docs and excellent team, so, I diced to try :)
17:34:47 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Modules: Address Hierarchy 2.2.0 uploaded to OpenMRS Module Repository <https://dev.openmrs.org/modules/view.jsp?module=addresshierarchy&ampversion=&amp2.2.0>
17:35:20 <mvorobey> decided, sorry :)
17:35:56 <rafa> mvorobey: that's awesome!
17:37:13 <rafa> mvorobey: I hope you'll enjoy and stay with us
17:37:35 <mvorobey> rafa: am working with OpenMRS since last week but I do believe that it s really good
17:37:58 <rafa> mvorobey: if you're a student, go after GSoC
17:38:21 <rafa> mvorobey: have you heard about it?
17:38:55 <rafa> mvorobey: OpenMRS has many interesting projects within this programme each year
17:39:55 <mvorobey> rafa: yep, I have heard, I will work on improving of my knowledges about OpenMRS and will try it
17:40:27 <rafa> mvorobey: great, good luck!
17:40:47 <mvorobey> rafa: nevertheless, Rafal, I noticed that link to the source code repo on MDS Sprint Dashboard need to be changed to this one http://svn.openmrs.org/openmrs-modules/metadatasharing/trunk/, because now it's a bit shorter http://svn.openmrs.org/openmrs-modules/metadatasharing/
17:41:00 <mvorobey> rafa: thanx
17:41:26 <rafa> mvorobey: thx, I'll fix it.
17:42:30 <mvorobey> rafa: np, proszę :)
17:43:01 <rafa> mvorobey: spasiba :D
17:43:13 <rafa> mvorobey: I wish I knew cyrylic :D
17:44:12 <mvorobey> rafa: couple of years ago I was in Germany and communicated with guys from Poland and found out that our languages are very similar :)
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17:45:23 <rafa> mvorobey: yes, we've got a lot in common :) I met just one girl from Ukraine.
17:45:37 <rafa> mvorobey: I hope it'll change after euro 2012 :D
17:48:29 <mvorobey> rafa: yep, it's really true, I tried to spoke in Polish nearly two months, so I still remember some words and word combinations :)
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18:04:09 <bwolfe> !scrumon rafa
18:04:09 * OpenMRSBot says the DAILY SCRUM MEETING is STARTING. This meeting should not last longer than 15 minutes. Please hold other comments until the end of the meeting, or message someone privately. Thank you! ScrumMaster rafa- you may begin when ready.
18:07:33 <bwolfe> where is rafal?
18:07:44 <bwolfe> and where is wyclif for that matter?
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18:26:20 <rafa> bwolfe_: you've started half an hour earlier :)
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18:26:57 <bwolfe> rafa, ah, no wonder no one was around!
18:27:14 <rafa> yeah, 4 minutes to go :)
18:31:25 <rafa> hmm still no wyclif
18:32:03 <rafa> bwolfe: do you mind waiting yet another 5 minutes?
18:32:07 <bwolfe> probably still at lunch. :-p
18:32:08 <bwolfe> sure
18:32:14 <bwolfe> I've waited 30 already ;-)
18:32:29 <rafa> it's why I'm asking :D
18:36:49 <rafa> well
18:36:54 <rafa> !scrumon rafa
18:36:54 * OpenMRSBot says the DAILY SCRUM MEETING is STARTING. This meeting should not last longer than 15 minutes. Please hold other comments until the end of the meeting, or message someone privately. Thank you! ScrumMaster rafa- you may begin when ready.
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18:37:57 <rafa> mvorobey: once again welcome to our sprint
18:38:05 <rafa> bwolfe: ready to report?
18:38:24 <bwolfe> uh, sure. :-)
18:38:30 <bwolfe> why do I have to start? ;-) hehe
18:38:34 <mvorobey> thanx, i'm still here :)
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18:39:01 <bwolfe> today:
18:39:02 <bwolfe> MDS-172
18:39:02 <bwolfe> started MDS-174
18:39:02 <bwolfe> TRUNK-2434
18:39:02 <bwolfe> listener duplication bug
18:39:02 <bwolfe> dev call
18:39:06 <bwolfe> leadership call
18:39:08 <bwolfe> no blockers
18:39:32 <bwolfe> rafa, I have to take tomorrow off. so our skeleton crew will be even more skeleton!
18:39:40 <rafa> bwolfe: lol
18:39:50 <rafa> bwolfe: okay thanks for letting me know
18:40:15 <rafa> bwolfe: do you feel like you'll have time to finish your tickets by the end of this sprint?
18:40:32 <bwolfe> rafa, I have a week, right?
18:40:36 <rafa> right
18:41:21 <rafa> bwolfe: I take it as yes :D
18:41:26 <rafa> my update:
18:41:32 <rafa> Today:
18:41:33 <rafa> * Reviewed Wyclif's commits
18:41:33 <rafa> * Investigated on META-178: Scripts are broken on module jsps
18:41:33 <rafa> https://tickets.openmrs.org/browse/META-178
18:41:33 <rafa> * META-170: Spliting metadata packages into multiple sub-packages
18:41:33 <rafa> https://tickets.openmrs.org/browse/META-170 (I guess it'll be the biggest change in the module)
18:41:33 <rafa> Tomorrow:
18:41:34 <rafa> * Need to poll about META-177 on the dev list
18:41:34 <rafa> * Finish testing and commit META-170: Spliting metadata packages into multiple sub-packages
18:41:35 <rafa> https://tickets.openmrs.org/browse/META-170
18:41:35 <rafa> * Update the basic module (postponed from today)
18:41:36 <rafa> Blockers:
18:41:36 <rafa> * Can't reproduce META-178. Wyclif, can you provide more details on the ticket?
18:41:43 <bwolfe> sorry, yes, thats plenty of time
18:41:48 <rafa> but no wyclif here :D
18:42:05 <rafa> I spoke to him today and he seems to be on track
18:42:07 <bwolfe> !ticket META-170
18:42:09 <OpenMRSBot> bwolfe: [#META-170] Spliting metadata packages into multiple sub-packages - OpenMRS JIRA - https://tickets.openmrs.org/browse/META-170
18:42:57 <rafa> mvorobey: if there's anything you'd like to share feel free :) especially if something blocks you from progressin on your ticket (but I guess it's too early for you)
18:43:28 <bwolfe> which ticket did you pick up mvorobey?
18:43:46 <mvorobey> you're sure :) !META-166
18:43:56 <mvorobey> !ticket META-166
18:43:58 <OpenMRSBot> mvorobey: [#META-166] Display a nicer error message for org.openmrs.api.APIException: The global property metadatasharing.systemConceptSource was not found! - OpenMRS JIRA - https://tickets.openmrs.org/browse/META-166
18:44:35 <mvorobey> am just trying to understand basics of MDS module
18:44:50 <mvorobey> reading guides, installing it
18:44:50 <rafa> mvorobey: it happens if you install a module and forget to set concept source before exporting concepts
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18:45:09 <mvorobey> rafa, thanx
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18:45:31 <rafa> mvorobey: cool, we're in the same timezone so you can easily catch me on irc in case of any questions
18:45:34 <bwolfe> rafa, is META-170 just to prevent OOMs ?
18:46:42 <rafa> bwolfe: yes
18:47:08 <rafa> bwolfe: but to also speed up selecting things to export
18:47:30 <rafa> bwolfe: it's terribly slow for 40 000 concepts :/
18:47:46 <rafa> bwolfe: I'm also adding progress bar
18:48:16 <bwolfe> for import or export?
18:48:36 <rafa> bwolfe: I've added for export so far
18:48:47 <rafa> bwolfe: I'll see if it can be easily done for import
18:49:31 <rafa> !scrumoff
18:49:31 * OpenMRSBot says the DAILY SCRUM MEETING has ENDED. This channel is now returned to normal hacking operations. Post-scrum meeting follow-up conversations may now begin.
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18:54:06 <mvorobey> rafa: I just reproduced that bug with metadatasharing.systemConceptSource, so I will trying to fix it :)
18:54:57 <rafa> mvorobey: that was fast!
18:56:44 <mvorobey> rafa: :) maybe, but when I'll trying to do the ticket, this will probably take more time :)
18:57:47 <rafa> mvorobey: it's okay, no need to hurry :)
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19:03:27 <downeym> bwolfe: just back from judge's
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19:30:02 * suranga thinks that its nice to have people junior than himself on the openmrs IRC !
19:30:10 <downeym> :P
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20:11:41 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Modules: Register 1.0.6 uploaded to OpenMRS Module Repository <https://dev.openmrs.org/modules/view.jsp?module=register&ampversion=&amp1.0.6>
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