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<upul`> bwolfe do you know about nook free fridays?
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<bwolfe> upul`, I saw it once
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07:07:21
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<bwolfe> is there a page for it?
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07:08:45
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<upul`> bwolfe: yes there was a blog with the category, http://bookclubs.barnesandnoble.com/t5/The-NOOK-Blog/bg-p/Unbound/label-name/Free%20Fridays
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<OpenMRSBot> <http://ln-s.net/9ElR> (at bookclubs.barnesandnoble.com)
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<mnunez> Good morning!
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<dkayiwa> morning
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09:33:53
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<mnunez> Hi there dkayiwa! How's your connection doing?
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09:34:42
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<dkayiwa> doing well today :)
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09:35:43
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<mnunez> dkayiwa: Mind if we go back to yesterday's XForm question?
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09:35:55
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<dkayiwa> no i do not mind
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09:36:58
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<mnunez> dkayiwa: Great, thanks! So, how would you suggest concepts on an XForm repeat box?
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09:37:16
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<dkayiwa> like i told you yesterday
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09:37:24
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<mnunez> dkayiwa: I did the ConvSet as you said
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09:38:23
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<mnunez> dkayiwa: I guess your connection timed out before I got the answer... :(
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09:39:02
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<mnunez> I just got the "leave the coded concept without answers" part
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09:40:46
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<dkayiwa> ok
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09:45:13
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<mnunez> That would only get me a blank text box on the XForm for the coded concept. How do I use it to store finding class concepts, for example?
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<mnunez> dkayiwa
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10:11:22
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<dkayiwa> mnunez: yes that is correct, then select that text box on the design surface
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10:11:32
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<dkayiwa> mnunez: and set its external source property
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10:12:00
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<mnunez> dkayiwa: to concept_name?
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<mnunez> dkayiwa: I think I've got it. External source: concept_name
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<mnunez> value=concept_id
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<mnunez> display value=name
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<mnunez> dkayiwa: That works. That lists all concepts, but regardless their class
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<dkayiwa> mnunez: did you set the filter field?
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10:16:30
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<mnunez> dkayiwa: No. What field would I filter anyways? concept_name table does not have a concept_class column
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<dkayiwa> mnunez: set exteranl source to: select cn.name, cn.concept_id from concept_name cn inner join concept c on cn.concept_id=cn.concept_id
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10:20:01
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<dkayiwa> where c.class_id=4
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10:21:59
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<mnunez> dkayiwa: Ha! I was trying select concept.concept_id, concept.class_id, concept_name.concept_id, concept_name.name from concept, concept_name where concept.concept_id=concept_name.concept_id;
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10:25:42
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<Boby> Anybody know pass and username to access page: dev.emeka.ca:8080/openmr
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10:25:54
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<Boby> Please help me
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10:26:10
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<Boby> Please, Please :(
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10:26:14
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<dkayiwa> Boby: is that your server?
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10:26:30
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<Boby> No
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10:26:43
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<dkayiwa> you want to hack into it Boby ? :)
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10:28:16
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<Boby> I just want web server to up Open MRS and then test with device android
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10:28:38
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<dkayiwa> try the openmrs demo
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10:29:13
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<dkayiwa> http://demo.openmrs.org/openmrs
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10:30:07
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<bwolfe> Boby, default username is "admin" and the password at install is usually "test" or "Admin123"
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10:30:12
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<dkayiwa> Boby: by the way you can even connect to a local instance on your computer
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10:30:34
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<mnunez> dkayiwa: Works! Do you mind if I create an Examples page in the XForm documentation to add these kind of stuff?
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10:30:59
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<dkayiwa> mnunez: that is so so so sweet of you!!!!!! :)
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10:31:16
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<dkayiwa> mnunez: if all users were volunteering to do like you, i would fix more bugs :)
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10:32:02
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<mnunez> dkayiwa: It's not just about bugs. This kind of stuff is a really common case of use, don't you think?
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10:32:09
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<dkayiwa> Boby: openmrs demo username=admin password=test
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10:32:16
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<Boby> But with http://demo.openmrs.org/openmrs I can't add module
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10:32:31
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<dkayiwa> mnunez: yes you are correct
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10:32:44
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<dkayiwa> Boby: which module did you want to install?
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10:33:06
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<Boby> just my module
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10:33:36
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<dkayiwa> Boby: how about creating a local openmrs instance on your computer and then you connect to it from your android phone?
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10:34:45
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<Boby> I just use web service
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10:35:08
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<dkayiwa> Boby: yes you can have the web service running on your computer
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<pascal`> bwolfe++
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10:36:39
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<Boby> dkayiwa, you can see it http://rwinkwavu.cs.washington.edu:8080/openmrs
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10:36:50
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<Boby> With it I can add module
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10:37:14
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<Boby> But not module Cohort Builder to connect android
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10:37:41
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<dkayiwa> Boby: that is because Yaw enabled web based module upload. which is not the case for the openmrs demo server
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10:38:14
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<dkayiwa> Boby: isnt Yaw's server enough for you?
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10:38:53
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<Boby> Do you know any server similar dkayiwa?
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10:38:59
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<Boby> Can you help me ?
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10:39:28
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<dkayiwa> Boby: the other servers i know are not for public access
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10:39:48
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<dkayiwa> Boby: am still asking, why do you need more than one server?
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10:41:53
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<Boby> I have client run android CLINIC download from Yaw's and now I just try to test it with server Open MRS
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10:42:55
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<Boby> But I think, it does not have module Cohort Builder
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10:43:10
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<dkayiwa> Boby: if it works on Yaw's it will work on others
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10:43:33
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<dkayiwa> Boby: the only other option am aware of is for you to set up a local instance on your computer
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10:44:24
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<Boby> Do you know link svn to check out module Cohort Builder ?
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10:44:31
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<Boby> Can you share me ?
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10:45:27
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<dkayiwa> Boby: i think it is: http://svn.openmrs.org/openmrs-modules/reportingcompatibility/
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10:45:27
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<OpenMRSBot> <http://ln-s.net/5Tpt> (at svn.openmrs.org)
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10:47:11
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<Boby> with http://ln-s.net/5Tpt
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10:47:27
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<Boby> What URL to enter ?
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10:47:37
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<dkayiwa> http://svn.openmrs.org/openmrs-modules/reportingcompatibility/
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10:47:38
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<OpenMRSBot> <http://ln-s.net/5Tpt> (at svn.openmrs.org)
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10:47:56
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<dkayiwa> Boby: ignore the openmrsbot
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10:48:04
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<dkayiwa> :)
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<Boby> Ok thanks so much
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10:51:55
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<Boby> Let me check out and try to build it
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10:52:14
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<dkayiwa> ok
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10:55:20
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<pascal`> bwolfe, what's the link to the omrs book?
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10:55:44
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<bwolfe> www.booki.cc/openmrs
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<pascal`> thx
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11:00:12
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<bwolfe> a lot of it is stuff from the wiki
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11:00:20
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<bwolfe> but put together nicely so that people can read/find it
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11:00:22
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<pascal`> bwolfe, yeah, looks good though
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<surangak_> going offline for a while guys, something just came up :-(
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<pascal`> bwolfe, occ server references a file called updates.sql in the README. Should it be obvious where it's located? (=
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11:35:29
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<bwolfe> the resources folder
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11:38:14
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<pascal`> bwolfe, yeah, that is the obvious location
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11:38:31
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<bwolfe> find it?
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11:38:38
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<bwolfe> pascal`, control-shift-r is your friend in eclipse
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11:40:10
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<pascal`> bwolfe, it was deleted in revision 19108
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11:40:24
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<pascal`> bwolfe, I'll find out what's up from ryan
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11:40:26
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<bwolfe> odd
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11:41:58
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<pascal`> I'm guessing he just forgot to update the README
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12:15:13
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<bwolfe> dkayiwa, the dev call today is about a 1.9 update. do you have things to say?
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12:15:24
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<dkayiwa> ok
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12:15:29
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<dkayiwa> not at the moment
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12:15:59
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<bwolfe> dkayiwa, ok, in the next 1.5 hours will you come up with something? :-)
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12:16:06
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<bwolfe> e.g.: how many tickets are left
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12:16:18
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<bwolfe> your prediction for when the alpha can be released
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12:16:27
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<bwolfe> whether we need to take out any more features
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12:16:29
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<bwolfe> etc etc
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12:16:34
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<dkayiwa> bwolfe: ok will try to think through that
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12:18:23
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<bwolfe> dkayiwa, https://wiki.openmrs.org/display/RES/2011-10-20+Developers+Forum
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12:18:28
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<OpenMRSBot> <http://ln-s.net/9En9> (at wiki.openmrs.org)
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<dkayiwa> ok
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12:19:23
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<bwolfe> thanks!
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14:07:08
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<OpenMRSBot> Recent updates in the world of openmrs: On Twitter: OpenMRS: RT @bawolfe: I'm really excited by what has been done with the @OpenMRS book already! Lots of great info to help folks get started! <http://twitter.com/OpenMRS/statuses/127017506366955520>
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16:39:09
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<jafaeldon> does anyone know how to "reset" openmrs to the installation phase?
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16:39:47
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<jafaeldon> i like to go back and do the installation process again
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16:40:35
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<dkayiwa> jafaeldon: so you do not want to preserve your existing database data?
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16:40:54
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<jafaeldon> no i want to start from scratch
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16:41:29
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<dkayiwa> jafaeldon: stop tomcat, then delete the database and the runtime properties file
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16:41:36
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<jafaeldon> i tried to delete the db already but when i run the webapp, it tries to use the old connection
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16:41:51
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<jafaeldon> which runtime properties file?
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16:42:11
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<dkayiwa> jafaeldon: the one used by the webapp to get database connection settings
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16:42:42
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<dkayiwa> jafaeldon: you can look in the tomcat logs to see its location
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16:44:50
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<jafaeldon> im working with the source code and using maven jetty:run. I tried to delete the project and download again from svn repo. but it didn't reset
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16:45:59
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<dkayiwa> jafaeldon: https://wiki.openmrs.org/display/docs/Overriding+OpenMRS+Default+Runtime+Properties
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16:46:00
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<OpenMRSBot> <http://ln-s.net/8c91> (at wiki.openmrs.org)
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<jafaeldon> found it, thanks!
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16:50:46
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<dkayiwa> good
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<Suranga> good morning james_regen :-)
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17:31:24
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<Suranga> r u there ?
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17:31:40
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<james_regen> Suranga: hi, i'm here
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17:32:09
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<Suranga> james_regen, I finally understood yesterdays conversation after going though the logs again :-)
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17:32:19
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<Suranga> today i did as follows -
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17:32:51
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<Suranga> 1. re wrote the analyzer class so that MutualInformationAnalyzer extends FrequencyAnalyzer
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<Suranga> james_regen, sorry, got disconnected...
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17:35:07
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<Suranga> james_regen, , now I can do really basic (john,M) etc. calculations...
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17:35:07
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<james_regen> Suranga: that's ok. i saw number 1 of what you did
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17:35:32
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<james_regen> Suranga: so you have code to count the frequency of the combinations of values?
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<Suranga> james_regen, yep, I rough draft is working
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<Suranga> (not very nice code)
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<Suranga> since you r going on holiday, I thought I'll go ahead in super speed, and clean up my code between the 24 - 28 :-)
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17:36:54
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<Suranga> james_regen, would u like to look at the new classes ?
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<Suranga> james_regen, you earlier said "Suranga: that's ok. i saw number 1 of what you did"
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<james_regen> sure
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17:38:57
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<Suranga> james_regen, Im not sure what u ment by that...
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17:39:16
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<james_regen> Suranga: i saw: 1. re wrote the analyzer class so that MutualInformationAnalyzer extends FrequencyAnalyzer
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<james_regen> that was the last message before you got disconnected.
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<Suranga> oh, sorry
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<Suranga> Suranga> 2. moved the code that does pairwise combination generation into constrcutor
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<Suranga> <Suranga> 3. wrote the analyzeData() and finishAnalysis() methods
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17:40:10
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<Suranga> james_regen, I did no. 2 and 3 too
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<Suranga> james_regen, the analyzer class is at http://pastebin.com/n8JdN7bf
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<james_regen> Suranga: oh, ok that's good news. sounds like things are making sense
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<Suranga> james_regen, yep, I finally understood what u ment :P
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<Suranga> james_regen, the calculate method in the analysispanel class
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<Suranga> james_regen, terrible sorry, got cut off again ( really bad weather over here :-(
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<Suranga> james_regen, the last I saw from you was :<james_regen> Suranga: oh, ok that's good news. sounds like things are making sense
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17:50:54
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<james_regen> Suranga: that's ok, it gave me time to look at the code. i have a question about how you're storing the combinatinos of values
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17:51:29
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<Suranga> james_regen, sure
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17:52:02
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<Suranga> mccallumg, hi Glen, so hows the doc camp ? :-)
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<mccallumg> hi Suranga . Today it is a little stressful. We're under the gun - so to speak.
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17:52:53
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<james_regen> Suranga: the key you're using are the two values concatenated, and they're being stored in a hashmap. are all the values for different combinations stored in that same map?
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17:53:10
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<Suranga> mccallumg, I saw the boook online, they have been working u really haaard :-)
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17:53:33
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<Suranga> james_regen, no, not all the values
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17:53:42
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<Suranga> james_regen, only values that really exist
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17:53:52
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<Suranga> james_regen, let me look for an example
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17:54:11
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<james_regen> Suranga: i'm wondering if the same value exists in two different fields, like blank values, if the entry for both will be the same
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17:55:22
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<Suranga> james_regen, umm, yes, but in that case, we set the count to 2
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<Suranga> for example, John, male = 2
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<james_regen> like if a record is first_name=john last_name=john gender=male if after counting the frequencies, you'd end up with (john,john)=1, (john,male)=2
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17:56:15
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<james_regen> Suranga: i think we've been talking too much using similar examples if we can write the same thing at the same time
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<Suranga> james_regen, Im not sure how u will get (john,male)=2
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<Suranga> your last comment was not very clear, Im afraid...
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<james_regen> Suranga: when looking at the mutual information between first_name and gender and last_name and gender, if we're looking at all possible pairs of columns
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<Suranga> james_regen, mmm... Dr. Shaun said only existing pairs of columns
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<Suranga> james_regen, for example
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17:59:07
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<Suranga> 1|john|M|10
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<Suranga> 2|max|M|20
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<Suranga> 3|max|F|30
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<Suranga> with these records, John,F is not possible
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<Suranga> only John,M Max,M and max,F
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<james_regen> Suranga: i think another way of what i'm thinking is i'm wondering if the key to the hashmap, a+b, is unique enough to be specific to one column pair, and if that matters
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18:02:30
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<Suranga> james_regen, please give me a minute
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<Suranga> to check that
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<Suranga> james_regen, I see what u mean
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<Suranga> each of those values are set into a Column pair object
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18:06:36
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<Suranga> so if there were cases such as fname=john,lname=john and nickname=john
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18:06:36
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<Suranga> it would be calculated as two different pairs (john,john) =1 and (john,john)=1
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18:06:37
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<Suranga> the (a+b) will calculate the number of similar tokens per each ColumnPair only..
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18:07:41
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<james_regen> Suranga: ok, i didn't notice where the hashmap was associated with each ColumnPair object
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18:07:55
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<Suranga> james_regen, the code is reeeely ugly...
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18:08:16
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<Suranga> in fact, i need to do some serious testin on it
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18:08:42
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<Suranga> james_regen, oh, by the way, I have commit permissions, I commited that lowercase change to Record.java
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18:09:03
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<james_regen> Suranga: i was about ot ask if you had been able to test it at all. i was also about to ask if you could commit code
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18:09:17
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<Suranga> james_regen, :-)
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18:09:48
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<Suranga> james_regen, let me do this, tomorrow, Ill write some basic sample data, and show you the retreived outputs...
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<james_regen> ok
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<Suranga> james_regen, once thats done, I also need to expand the code so that I can evaluate multiple blocking columns
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18:10:31
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<Suranga> james_regen, thats not supported yet
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18:15:55
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<Suranga> james_regen, r u familiar with Math.Log() ? I have a teenly question on that, if you're free...
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18:16:35
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<james_regen> Suranga: i think i've used it before
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<Suranga_> james_regen, assume I need to calculate Ep(log2p) using math.log
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<Suranga_> (lets assume that p = 0.2
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18:24:19
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<Suranga_> james_regen, so that would be 0.2(log 2+0.2) would it ?
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18:25:30
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<james_regen> Suranga_: is that log2p log(2) base 2, or is it log(2p) ?
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18:26:27
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<Suranga_> james_regen, the number 2 is printed small, so I assume its log(2) base 2
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18:30:05
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<james_regen> Suranga_: Math.log uses a base of e, and the other log function, Math.log10, uses base 10. i can't remember how to convert bases, isn't it a division? what's the Ep before the log part?
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18:30:29
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<Suranga_> james_regen, E is the summation symbol
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<james_regen> oh, ok, i didn't look close enough
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18:31:44
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<Suranga_> james_regen, Σp(log2 P) :-)
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<Suranga_> james_regen, I think u r right about the division thing
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18:32:02
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<Suranga_> james_regen, I was reading up some on it..
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<james_regen> i've had to do it in other code, but it was a while ago, and that part of school was several years before that
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<Suranga_> james_regen, dont worry about it, I'll check it out
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<Suranga_> james_regen, i'll report back tomorrow on progress :P
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18:36:14
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<james_regen> Suranga_: ok
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18:37:38
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<Suranga_> james_regen, after tomorrow, i'l be seeing u on the 29th, right ?
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18:38:15
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<james_regen> Suranga_: i'll be back from vacation, but not on IRC. i'll be at work again the 31st
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18:38:33
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<Suranga_> james_regen, oh, I seee
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<Suranga_> james_regen, no problem, Ill try to spend that time being useful :-)
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18:39:45
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<Suranga_> james_regen, thanks for all the help you've given
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18:40:15
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<james_regen> Suranga_: it's not a problem, it's good to have help with the code
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18:41:18
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<Suranga_> james_regen, hopefully this project will be a sucess :-)
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18:49:15
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<downeym> Suranga_: Glen is here, and thanks you for the shirt :)
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18:49:41
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<Suranga_> downeym, I hope the shirt was not too horrible looking :-)
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18:50:13
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<Suranga_> downeym, It looks better after being washed once (as my brother in law just found out :-)
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<mccallumg> Suranga: yes. thanks so much for the shirt! it is great.
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<Suranga_> mccallumg, next time I will give Sri lankan chocolates ! :p
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<downeym> Suranga_: if you are a mentor next year maybe you can come to the mentor summit
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<Suranga_> downeym, I'd love to be a mentor, irrespective of wether I get to come to the summit or not. but dont know if they'll let me :-(
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<Suranga_> going offline for a while guys, I'll be back soon :)
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