IRC Chat : 2009-12-17 - OpenMRS

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00:21:36 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11486]: patientflags: added generateFlagsForPatient(Patient,Filter) method and … <http://dev.openmrs.org/changeset/11486>
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00:53:37 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11487]: patientflags: changed "tag" field/variable in Tag object to "name" <http://dev.openmrs.org/changeset/11487>
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06:59:58 <upul> hey pascal`
07:00:06 <pascal`> hi upul
07:18:20 <pascal`> Echidna, feeling better?
07:19:00 <upul> don't drive naked Echidna
07:20:49 <pascal`> =O
07:35:41 <pascal`> upul, ever seen a class not found exception when trying to run a junit testcase?
07:36:03 <pascal`> i've seen it sometimes, and usually cleaning the project, or refreshing or rebuilding helps, but not this time.. arg.
07:41:42 <upul> never
07:43:09 <pascal`> ok
07:43:17 <pascal`> just needed to make a change to the test and rebuild
07:43:28 <pascal`> aparently the tests directory isn't in the source path
07:43:36 <pascal`> so wasn't building when i cleaned/refreshed
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09:03:57 <upul> i don't get errors in junit i get shiny red bars
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09:28:12 <Echidna> pascal`: not rly
09:28:29 <pascal`> =\
09:37:25 <upul> faked sick
09:37:41 <upul> Echidna malingering
09:49:40 <Echidna> if i was faking sick i wouldnt be at the office now
09:49:44 <Echidna> otherwise what is the point
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09:57:51 <upul> i can't go home today until the evening
09:59:02 <upul> road closed for precident's going to the elections office
10:00:52 <Echidna> what a dick
10:01:15 <upul> this is why sri lanka is sri lanka
10:01:32 <Echidna> are there other candidates?
10:01:57 <upul> former army chief only contender
10:02:10 <upul> there's 23 candiates :-D
10:02:31 <Echidna> who are you voting for
10:02:48 <upul> most of them are precidents henchmen
10:02:58 <upul> army chief
10:03:51 <upul> but he said the stupidest thing last week, government media is saying traitor, traitor since then
10:04:42 <upul> we have opposition leader who lost, i don't know 15 elections or so
10:05:08 <Echidna> =o
10:05:21 <Echidna> so the media is controlled by the govt?
10:05:54 <upul> he never resigns, until he's going they will be opposition ad inifinitum
10:06:14 <upul> nope there are some, and many private ones
10:06:37 <upul> but some of them are bent to governemnt, (businessman)
10:07:30 <upul> i was hoping army chief and do something like singapore or south korea
10:07:53 <Echidna> what did they do
10:11:03 <upul> http://en.wikipedia.org/wiki/Park_Chung-hee
10:11:04 <upul> http://en.wikipedia.org/wiki/Lee_Kuan_Yew
10:11:45 <upul> we need somebody like that
10:12:01 <upul> but i don't think it'll happen
10:17:34 <upul> yesterday another politican jumped from opposition to governement
10:19:02 <upul> got a minister position, there's so many like that, i think we have the biggest number of ministers must be 100+
10:23:38 <Echidna> =o
10:27:56 <upul> how's germany Echidna
10:31:47 <Echidna> cold
10:31:51 <Echidna> about -5°C
10:32:30 <upul> cold is good
10:34:02 <Echidna> not rly
10:34:37 <upul> i don't like sweaty weather
10:35:59 <upul> warm countries people do nothing
10:36:15 <upul> unless somebody drive them with a stick like in singapore
10:38:23 <upul> how's germany's politicians Echidna
10:38:55 <Echidna> uptight
10:38:57 <Echidna> but mostly solid
10:39:09 <Echidna> as far as not being corrupt goes etc
10:40:29 <upul> in sri lanka it's bribes, thuggery and currupted
10:41:05 <upul> that's why germany is germany and sri lanka is sri lanka
10:44:52 <Echidna> well corruption is common
10:44:59 <Echidna> it's not jsut a sri lankan thing
10:45:25 <Echidna> corruption in the public sector is quite common in russia, for example
10:46:36 <upul> yeah as well as in in somalia, uganda, bangladesh ... :-D
10:52:07 <upul> and there's a pattern
10:55:53 <Echidna> well i guess corruption is proportional to poverty
10:59:11 <Echidna> people play by the rules when they can afford to
11:02:36 <upul> but if everyone play by the rules then it will come to a state that everyone can afford to
11:05:42 <Echidna> that kind of thinking is not natural for humans
11:05:49 <Echidna> people care about themselves
11:07:20 <upul> but you can make people do the right thing
11:08:07 <Echidna> people have tried to force people into doing what they thought was right
11:08:21 <Echidna> all of them were dictatorships and didnt do that well
11:09:02 <upul> singapore is doing that, and they're doing it really well
11:09:42 <upul> and south korea did that too
11:10:30 <upul> in sri lanka 'korea' is a word for shanties area because in 1960 they were like that
11:11:36 <upul> we sri lankan chimpanzees were bragging we are great
11:15:05 <upul> s/we/they
11:17:56 <upul> hope the road is open now
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12:27:16 <abdelkarim> hello
12:27:43 <abdelkarim> Am having problem looking at patient page with omrs 1.4.5: java.sql.SQLException: Unknown column 'this_1_.accession_number' in 'field list'
12:28:08 <abdelkarim> I've heard about a tomcat version issue ; would that be possible ?
12:28:35 <abdelkarim> Am using Apache Tomcat/6.0.18
12:28:55 <Echidna> do you have 6.0.16 by chance?
12:29:39 <abdelkarim> it's 6.0.18
12:29:52 <Echidna> i mean do you have a 6.0.16 around that you could install to test
12:29:56 <abdelkarim> it's from my repository (ubuntu)
12:30:00 <Echidna> oh
12:30:04 <abdelkarim> I certainly can
12:30:15 <abdelkarim> is 6.0.16 the recommended one ?
12:30:22 <Echidna> well no
12:30:36 <Echidna> but i read there was something 6.0.18 and up didnt handle well
12:30:45 <Echidna> or were more script about that made openmrs mess up
12:30:49 <Echidna> but that was fixed i think
12:31:00 <Echidna> it was a single/double quote issue in jsp i think
12:31:07 <abdelkarim> hum
12:31:08 <Echidna> so not a db issue
12:31:52 <abdelkarim> ok ; will try another version
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12:45:13 <abdelkarim> Echidna: exact same problem with 6.0.14
12:45:58 <pascal`> as jmiranda pointed out in the implementers list email, it's a db sync issue
12:46:10 <pascal`> it's looking for a column called accession_number which doesn't appear to exist
12:48:43 <abdelkarim> ok
12:48:44 <abdelkarim> thanks
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13:55:30 <pascal`> hey bwolfe
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13:57:58 <bwolfe> hi pascal`
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14:24:54 <Echidna> hi
14:31:38 <bwolfe> hi Echidna
14:35:41 <Echidna> wut up
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14:41:59 <Echidna> why do commons-* libraries never complain about missing other commons jars until runtime?
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15:48:36 <bwolfe> Echidna: they're being "helpful"
15:51:22 <Echidna> lol..
16:00:15 <upul> germany has water bridges
16:03:02 <upul> http://inlinethumb27.webshots.com/44058/2027614660104237032S600x600Q85.jpg
16:03:07 <OpenMRSBot> <http://ln-s.net/4ho5> (at inlinethumb27.webshots.com)
16:12:33 <Echidna> =o
16:12:35 <Echidna> didnt know
16:14:01 <upul> http://en.wikipedia.org/wiki/Magdeburg_Water_Bridge
16:14:04 <OpenMRSBot> <http://ln-s.net/4hoK> (at en.wikipedia.org)
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16:43:23 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Tickets: Ticket #1976 (defect created): BIRT Module Error: Cannot get the result set metadata. <http://dev.openmrs.org/ticket/1976>
16:44:31 <bwolfe> upul: how much time per day do you spend on wikipedia looking up random things??
16:45:30 * Mkop goes to check IRC logs....
16:45:35 <Mkop> it better be worth it
16:46:04 <bwolfe> Mkop: I'm thinking its about twice a week upul posts a link to something on wikipedia (something random)
16:51:29 <Mkop> I don't get the point of that bridge
16:51:47 <Mkop> why don't the rivers just join, to make a + sign?
16:52:57 <bwolfe> lol, just put a stop sign in for the two rivers
16:53:46 <Echidna> a cop with a stick
16:54:16 <Mkop> I am running right now on 0 hours of sleep and a red bull
16:54:24 <Mkop> and I'm not at all tired
16:54:37 <Echidna> red bull contains bull semen
16:54:43 <Mkop> I had the red bull with me in my final
16:54:49 <Mkop> wasn't sure if I was gonna need it or not
16:55:02 <Mkop> but then I noticed myself doze off randomly while reading a question
16:55:05 <Mkop> that kinda sealed it for me
16:55:09 <Mkop> Echidna: myth.
16:55:32 <Echidna> i know =)
16:57:59 <Mkop> http://www.youtube.com/watch?v=nXa02tB8DLo
16:58:09 <Mkop> I want to make a commercial for red bull
16:58:29 <Mkop> shows 6 college students sitting around the table
16:58:38 <Mkop> bleary-eyed
16:58:51 <Mkop> clock in the background shows 4am
16:58:58 <Mkop> each one has a red bull in front of them
16:59:08 <Mkop> math equations all over the chalk board
16:59:25 <Mkop> one of them looks up tiredly and says "Welcome to my world. The world of redbull."
17:00:21 <upul> i just dozed off on the keyboard
17:01:32 <Mkop> actually, revise my commercial
17:01:42 <Mkop> the cameraman is walking through the library
17:01:59 <Mkop> at one table is a group of students with math equations behind them on the chalkboard
17:02:30 <Mkop> at another table is a guy with a laptop, with Microsoft Word open, and he's asleep on the keyboard
17:02:47 <Mkop> another guy is half asleep over his biology textbook
17:05:15 <Echidna> and?
17:05:39 <Echidna> looks like someone else dozed off on their keyboard lol
17:05:47 <upul> what's the difference between energy drink and other drink
17:05:58 <Echidna> the energy, duh!
17:06:54 <Mkop> I didn't doze off
17:07:03 <Mkop> the same ending applies
17:07:15 <Mkop> <Mkop> one of them looks up tiredly and says "Welcome to my world. The world of redbull."
17:07:25 <Echidna> one of who
17:07:38 <Mkop> the people in the library
17:07:44 <Echidna> remember, you moved the camera away from the math table
17:07:52 <Echidna> and to the table where people are asleept
17:07:53 <Echidna> -t
17:08:17 <Mkop> they're only half asleep
17:08:59 <Echidna> well that's a pretty depressing commercial
17:10:36 <upul> we have a commercial now in tv some times 3-4 going continously, actors saying vote for precident
17:10:48 <upul> gross abuse of power
17:11:24 <Echidna> does the other guy have ads?
17:11:42 <Echidna> it's common for parties to advertise on tv
17:11:52 <Echidna> the channels are required to air all of them
17:13:32 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11489]: chica * added checks for null dispense date * fixed doctor list on Manual … <http://dev.openmrs.org/changeset/11489> || OpenMRS Changesets: Changeset [11488]: rgccd * added checks for null dispense date <http://dev.openmrs.org/changeset/11488>
17:13:42 <upul> haven't seen any yet
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17:18:25 <Echidna> http://www.youtube.com/watch?v=TgbhheNpRZ8
17:18:38 <Echidna> the channels are required to identify political ads as such beforehand lol
17:26:03 <Mkop> they need to include the full 15 seconds before and 15 seconds after?
17:26:33 <Echidna> well it doesnt have to be 15 seconds
17:27:30 <Mkop> here, a political ad will usually have a 5 second "I'm Barrack Obama, and I approved this message" or the like
17:27:31 <Echidna> but they have to say "you're seeing the ad for the <election name> from <full party name>, <party abbreviation>. only the parties are responsible for the contents of the spot."
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17:31:33 <SparFux> Hi all.
17:31:45 <upul> hi
17:31:52 <SparFux> How are you?
17:32:02 <Echidna> hi
17:32:05 <Echidna> time to go home
17:32:28 <SparFux> Ok ok.
17:32:39 <SparFux> from work?
17:32:59 <upul> did you get openmrs problems fixed SparFux
17:33:09 <upul> database error or something
17:34:21 <SparFux> upul: no, unfortunately not.
17:34:37 <SparFux> I still got the problem that obviously there is no connection to the database.
17:34:49 <SparFux> I suspect tomcat6 to be the culprit though.
17:39:26 <SparFux> the ideas jmiranda had with the /etc/hosts, host.allow and host.deny don't seem to be the reason.
17:40:25 <upul> what was the issue you had
17:41:31 <SparFux> I am trying to install the openmrs, 2009-12-09 or stable version 1.5.1.
17:41:51 <SparFux> in the setup process I tried lots of combinations of options. All have the same failure.
17:42:38 <upul> SparFux: can you connect to mysql through mysql adminstrator or something?
17:43:03 <SparFux> the mysql command line works.
17:43:14 <SparFux> I am searching for the error log...
17:44:36 <SparFux> http://pastebin.com/m2907ecab
17:46:00 <SparFux> I get not output in /var/log/tomcat6 about any error and not in /var/log/msql/
17:46:33 <SparFux> only the installation process leads me to the page on pastebin.
17:46:38 <upul> and you have given correct mysql root credentials in the wizard?
17:46:50 <SparFux> upul: definitely
17:47:04 <SparFux> sudo -u mysql mysql -u root -p works ok.
17:47:13 <SparFux> I use the password which I use for this command line, too.
17:47:29 <SparFux> I read about some connection pooling problem in mysql or tomcat, whatever.
17:47:33 <SparFux> I am using tomcat6 and mysql5.
17:47:37 <upul> is there any access denied error in the logs or was that all you got
17:47:56 <SparFux> 5.1.41
17:48:23 <SparFux> wait a moment, I get something in syslog.
17:50:35 <SparFux> http://pastebin.com/f5c2631d4
17:52:43 <upul> do you give anything for mysql url in the wizard or use the default?
17:53:03 <SparFux> the default.
17:53:16 <SparFux> I tried to use 127.0.0.1 instead of localhost though, but didn't change anything.
17:56:38 <upul> try giving localhost and connect through command line, mysql -u root -p -h localhost
17:57:37 <SparFux> good idea. this works.
17:57:57 <SparFux> sudo -u tomcat6 mysql -u root -p -h localhost
17:57:59 <SparFux> work ok.
18:00:27 <upul> what is your os?
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18:04:14 <SparFux> upul: Debian/GNU linux sid.
18:08:02 <SparFux> I am trying to grasp http://pastebin.com/f5c2631d4 : "java.lang.Thread.run(Thread.java:636) Caused by: com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: Communications link failure  Last packet sent to the server was 0 ms ago."
18:12:01 <jmiranda> SparFux, i did a ton of research on this
18:12:13 <jmiranda> on the Communications link failure
18:12:14 <SparFux> jmiranda: :-)
18:12:20 <SparFux> Yes.
18:12:29 <SparFux> perhaps I should installed openjdk dbg version.
18:12:47 <jmiranda> yeah, i think if it's not fixed with the localhost/127.0.0.1 change
18:13:25 <SparFux> then?
18:13:35 <jmiranda> it might be a jdk issue
18:14:01 <jmiranda> i thought for sure it was a mysql permission issue
18:14:45 <SparFux> jmiranda: I am definitely sure it's not the mysql permissions.
18:14:55 <jmiranda> but it sounds like you've tried everything from that
18:15:02 <jmiranda> perspective
18:15:22 <SparFux> yes.
18:15:51 <SparFux> even the point is, user tomcat6 can use mysql command line tool to access mysql db as user "root" with proper passphrase.
18:16:14 <upul> SparFux: do you have a mysql administrator or something?
18:16:21 <upul> a gui
18:16:37 <SparFux> why a gui?
18:17:15 <SparFux> mysqladmin I think I can install.
18:17:34 <upul> there was that issue with an extra 'localhost' entry in the user tables preventing connections
18:17:51 <upul> but in this case it doesn't say access denied but worth a try
18:18:46 <SparFux> extra localhost?
18:21:42 <jmiranda> multiple permission rows for the openmrs user
18:21:59 <SparFux> Ah!
18:22:02 <SparFux> Hm...
18:22:06 <SparFux> I have three!
18:22:21 <jmiranda> select * from mysql.user where user = 'openmrs';
18:22:24 <jmiranda> that's fine
18:22:29 <jmiranda> you might have a couple
18:22:41 <jmiranda> but you should only one per host
18:22:57 <SparFux> http://pastebin.com/mf5b9b2b
18:23:23 <jmiranda> select host, user from mysql.user
18:23:48 <SparFux> well, I have one for openmrs, but three for root.
18:23:55 <jmiranda> that pastebin actually looks fine
18:24:15 <upul> i think those root ones could be a problem
18:24:20 <jmiranda> nope
18:24:31 <jmiranda> they specify access for specific hosts
18:24:42 <SparFux> ok, installed mysql-admin
18:24:44 <jmiranda> localhost, 127.0.0.1, computer-name
18:24:56 <jmiranda> root *should* have 3 hosts
18:25:12 <upul> i didn't see the user, host table
18:25:27 <upul> there could be root@localhost and root@% then root@localhost gets priority
18:26:10 <upul> and wizard may be getting the roo@%
18:26:31 <upul> i had that issue, my solution was to delete the root@localhost entry
18:26:39 <SparFux> hm....
18:26:47 <SparFux> but then wizard should be changed.
18:27:04 <upul> this openmrs user you created manually isn't it
18:27:28 <SparFux> yes.
18:27:29 <upul> wizard shouldn't have been able to touch the db
18:28:15 <SparFux> I cannot drop that user?
18:28:41 <upul> which user?
18:28:50 <jmiranda> here's what mine looks like
18:28:51 <jmiranda> http://pastebin.com/m3b7c5419
18:29:36 <SparFux> http://pastebin.com/m773819ce
18:29:56 <upul> i had root@% if i remember right
18:30:04 <upul> SparFux: user, host
18:30:29 <SparFux> http://pastebin.com/m7b39528c
18:30:47 <SparFux> I was trying to say: I cannot remove that openmrs user.
18:31:01 <jmiranda> right, what's the error
18:31:05 <SparFux> http://pastebin.com/m773819ce
18:31:13 <jmiranda> i think i ran into something similar on my mac yesterday
18:31:34 <jmiranda> yeah, that was the error i ran into
18:31:34 <SparFux> perhaps I should just reinstall the whole mysql crap.
18:31:43 <jmiranda> give me a second to remember what i did :)
18:32:20 * jmiranda punches himself for not writing it down
18:32:38 <SparFux> Yes, this happens to me also everything I don't write something down :-)
18:32:52 <SparFux> but not sure wether this is the problem for openmrs.
18:33:23 <upul> why is it talking about a 'openmrs'@'%' when there are no % entries
18:33:30 <jmiranda> i couldn't get the app to work when the database was in this state
18:33:39 <jmiranda> so i needed to remove all entries
18:33:48 <jmiranda> % means all
18:33:55 <SparFux> got it.
18:33:59 <jmiranda> do a quick google search on that exact error
18:34:05 <SparFux> http://pastebin.com/m2a46998d
18:34:11 <SparFux> this problem is solved.
18:34:18 <SparFux> drop user 'openmrs'@'localhost' ;
18:34:51 <upul> but there were no % entries
18:35:40 <SparFux> upul: I think mysql thinks % is the default when no hosts specified for user to be dropped.
18:35:49 <jmiranda> i'm on a call, but i'll check back in a little later
18:36:19 <SparFux> % obviously is the default.
18:36:41 <SparFux> anyway, perhaps I should kill all my previous installations and reinstall mysql from very scratch.
18:37:47 <SparFux> or better, I can try mysql 5.0 ? :-)
18:38:02 <upul> what were you using?
18:38:12 <SparFux> mysql 5.1
18:38:36 <SparFux> 5.1.41
18:38:39 <upul> then before reinstalling try removing the roo@'localhost'
18:38:49 <SparFux> ah, good idea :-)
18:38:53 <upul> that was the issue for me
18:39:58 <SparFux> i have root@myhostname, dropping too.
18:40:12 <SparFux> now only root@127.0.0.1 left.
18:40:35 <SparFux> same problem persists.
18:41:45 <SparFux> ok, I have to leave for now. will be back in about an hour I hope.
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18:45:47 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11490]: chica * updated required rgccd module value <http://dev.openmrs.org/changeset/11490>
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19:17:51 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11493]: ncd:Another fix to the latest diff to account for pre-existing reportable … <http://dev.openmrs.org/changeset/11493> || OpenMRS Changesets: Changeset [11492]: ncd:Fixed new SQL diff to delete the old County, Jurisdiction, and Zipcode … <http://dev.openmrs.org/changeset/11492> || OpenMRS Changesets: Changeset [11491]: ncd:Added tests for County, Jurisdiction, and Zipcode DAOs. Added SQL to … <http://dev.openmrs.org/changeset/11491>
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19:48:36 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11494]: chica * removed old installer <http://dev.openmrs.org/changeset/11494>
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20:19:55 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11495]: chica * updated form update scripts * added scripts to upgrade from chica … <http://dev.openmrs.org/changeset/11495>
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20:45:21 <SparFux> re
20:50:29 <bwolfe> re?
20:50:35 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11496]: chica * added upgrade scripts for location changes <http://dev.openmrs.org/changeset/11496>
20:52:48 <SparFux> yeah, I have been here one hour before.
20:52:56 <SparFux> more than one hour.
20:57:31 <bwolfe> SparFux: looks like 2 hours and 4 mins. :-)
20:59:08 <SparFux> hehe :-D
21:03:48 <SparFux> I read an article on the web - don't know where, was at work - that multiple instances of the jdbc driver could be the problem for my database connection problem.
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21:10:00 <SparFux> http://pastebin.com/m7c73cd57
21:10:49 <SparFux> I now have to hack into my new debian mysql installation agian. Password is unknown. :-(
21:22:03 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11497]: atd scorable_jit_branch * creating branch for development to support … <http://dev.openmrs.org/changeset/11497> || OpenMRS Tickets: Ticket #1977 (defect created): Patient Age Should stop increasing when the patient dies <http://dev.openmrs.org/ticket/1977>
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21:54:07 <OpenMRSBot> Recent updates in the world of openmrs: OpenMRS Changesets: Changeset [11498]: chica scorable_jit_branch * for development to support scorable JITs <http://dev.openmrs.org/changeset/11498> || Justin Miranda: On backing up and restoring large mysql databases <http://blog.justinmiranda.com/2009/12/on-backing-up-and-restoring-large-mysql.html>
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